Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 AL031432.5-201ENST00000641059 760 ntBASIC20.25■□□□□ 0.83
CDH22Q9UJ99 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH22Q9UJ99 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 TSPY21P-201ENST00000433481 731 ntBASIC20.24■□□□□ 0.83
CDH22Q9UJ99 TSPY23P-201ENST00000440136 739 ntBASIC20.24■□□□□ 0.83
CDH22Q9UJ99 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.24■□□□□ 0.83
CDH22Q9UJ99 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH22Q9UJ99 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 KRT8P41-201ENST00000533985 1514 ntBASIC20.23■□□□□ 0.83
CDH22Q9UJ99 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 HYMAI.1-201ENST00000620949 238 ntBASIC20.23■□□□□ 0.83
CDH22Q9UJ99 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH22Q9UJ99 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 CKBP1-201ENST00000565489 1086 ntBASIC20.22■□□□□ 0.83
CDH22Q9UJ99 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.22■□□□□ 0.83
CDH22Q9UJ99 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH22Q9UJ99 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 AL136038.3-201ENST00000561909 1096 ntBASIC20.21■□□□□ 0.83
CDH22Q9UJ99 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH22Q9UJ99 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH22Q9UJ99 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH22Q9UJ99 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms