Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBQLN2Q9UHD9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 DPP3P2-201ENST00000416030 1696 ntBASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN2Q9UHD9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 CROCCP1-201ENST00000426910 5675 ntBASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 AC073592.3-201ENST00000625118 1834 ntBASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 AC008894.3-201ENST00000624324 3103 ntBASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBQLN2Q9UHD9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 AL391005.1-201ENST00000623953 2435 ntBASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBQLN2Q9UHD9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms