Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 AC112907.3-201ENST00000577781 2400 ntBASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 KRT18P48-201ENST00000434763 852 ntBASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 VENTXP5-201ENST00000523979 775 ntBASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 KRT126P-201ENST00000549467 1181 ntBASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 ZNF815P-204ENST00000434898 1737 ntBASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DNMT3BQ9UBC3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 ZNF444P1-201ENST00000559497 298 ntBASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 AL121894.2-201ENST00000602977 491 ntBASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 CR769767.2-201ENST00000622735 460 ntBASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.94■□□□□ 0.78
DNMT3BQ9UBC3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 SPDYE15P-201ENST00000424157 909 ntBASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 TSPY23P-201ENST00000440136 739 ntBASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DNMT3BQ9UBC3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 LINC01311-201ENST00000565162 1445 ntBASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DNMT3BQ9UBC3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms