Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALCOCO1Q9P1Z2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALCOCO1Q9P1Z2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
CALCOCO1Q9P1Z2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CALCOCO1Q9P1Z2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CALCOCO1Q9P1Z2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 SOX15-203ENST00000570788 1093 ntBASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 AL359736.2-201ENST00000621992 437 ntBASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALCOCO1Q9P1Z2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 AC008550.1-201ENST00000511500 884 ntBASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALCOCO1Q9P1Z2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
CALCOCO1Q9P1Z2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CALCOCO1Q9P1Z2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms