Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 AL445675.2-201ENST00000620291 557 ntBASIC15.82■□□□□ 0.12
CALYQ9NYX4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CALYQ9NYX4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CALYQ9NYX4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 AL353807.1-201ENST00000427475 662 ntBASIC15.81■□□□□ 0.12
CALYQ9NYX4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.81■□□□□ 0.12
CALYQ9NYX4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 AL359736.2-201ENST00000621992 437 ntBASIC15.81■□□□□ 0.12
CALYQ9NYX4 AC131212.4-201ENST00000623606 975 ntBASIC15.81■□□□□ 0.12
CALYQ9NYX4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.81■□□□□ 0.12
CALYQ9NYX4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CALYQ9NYX4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 AL353708.3-201ENST00000610272 989 ntBASIC15.8■□□□□ 0.12
CALYQ9NYX4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CALYQ9NYX4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 FEM1AP3-201ENST00000403722 1741 ntBASIC15.8■□□□□ 0.12
CALYQ9NYX4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CALYQ9NYX4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CALYQ9NYX4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.79■□□□□ 0.12
CALYQ9NYX4 KSR1P1-201ENST00000446298 240 ntBASIC15.79■□□□□ 0.12
CALYQ9NYX4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms