Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 SIRPAP1-201ENST00000448467 1770 ntBASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC3Q9NUV7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC3Q9NUV7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 AC126763.1-201ENST00000552015 2118 ntBASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC3Q9NUV7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
SPTLC3Q9NUV7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.02■□□□□ 0.95
SPTLC3Q9NUV7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.02■□□□□ 0.95
SPTLC3Q9NUV7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SPTLC3Q9NUV7 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 AC007322.1-201ENST00000426983 750 ntBASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 BID-214ENST00000617586 542 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 AC073592.3-201ENST00000625118 1834 ntBASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 ANO7L1-203ENST00000602586 1720 ntBASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTLC3Q9NUV7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SPTLC3Q9NUV7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms