Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AL354751.1-201ENST00000412768 1863 ntBASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 KRT8P20-201ENST00000423953 1409 ntBASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AC092368.3-202ENST00000574180 1591 ntBASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCF3Q9NUQ8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
ABCF3Q9NUQ8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ABCF3Q9NUQ8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.39■□□□□ 0.7
ABCF3Q9NUQ8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 HLA-G-202ENST00000376815 851 ntBASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 HLA-G-203ENST00000376818 1127 ntBASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 AL031963.3-201ENST00000606441 850 ntBASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 MYC-209ENST00000641252 345 ntBASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 BICD1-207ENST00000551848 1962 ntBASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCF3Q9NUQ8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 AL390719.1-204ENST00000412397 1219 ntBASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 RNA5SP413-201ENST00000516373 109 ntBASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ABCF3Q9NUQ8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCF3Q9NUQ8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms