Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.4■□□□□ 0.86
CISHQ9NSE2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CISHQ9NSE2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.39■□□□□ 0.86
CISHQ9NSE2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.39■□□□□ 0.86
CISHQ9NSE2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CISHQ9NSE2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.39■□□□□ 0.86
CISHQ9NSE2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CISHQ9NSE2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.39■□□□□ 0.86
CISHQ9NSE2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CISHQ9NSE2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CISHQ9NSE2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CISHQ9NSE2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CISHQ9NSE2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 RBM17P1-201ENST00000453646 1190 ntBASIC20.38■□□□□ 0.85
CISHQ9NSE2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 AL355075.4-201ENST00000554988 638 ntBASIC20.38■□□□□ 0.85
CISHQ9NSE2 CKBP1-201ENST00000565489 1086 ntBASIC20.38■□□□□ 0.85
CISHQ9NSE2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
CISHQ9NSE2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CISHQ9NSE2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CISHQ9NSE2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CISHQ9NSE2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms