Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 AC006058.3-201ENST00000606217 1069 ntBASIC17.75■□□□□ 0.43
POLE3Q9NRF9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 TNXA-203ENST00000507684 2038 ntBASIC17.75■□□□□ 0.43
POLE3Q9NRF9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 AC098818.2-201ENST00000564925 2320 ntBASIC17.75■□□□□ 0.43
POLE3Q9NRF9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
POLE3Q9NRF9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLE3Q9NRF9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 FEM1AP3-201ENST00000403722 1741 ntBASIC17.73■□□□□ 0.43
POLE3Q9NRF9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 POU5F1P3-201ENST00000428824 1078 ntBASIC17.73■□□□□ 0.43
POLE3Q9NRF9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
POLE3Q9NRF9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 IRX1P1-201ENST00000438849 1838 ntBASIC17.72■□□□□ 0.43
POLE3Q9NRF9 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.72■□□□□ 0.43
POLE3Q9NRF9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 AL445675.2-201ENST00000620291 557 ntBASIC17.72■□□□□ 0.43
POLE3Q9NRF9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLE3Q9NRF9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms