Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PFDN4Q9NQP4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PFDN4Q9NQP4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN4Q9NQP4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN4Q9NQP4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 AC005829.2-201ENST00000571422 1056 ntBASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 AC092118.2-201ENST00000613495 667 ntBASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN4Q9NQP4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 CROCCP1-201ENST00000426910 5675 ntBASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN4Q9NQP4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN4Q9NQP4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms