Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS4Q9NQG7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 AL031432.5-201ENST00000641059 760 ntBASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.75■□□□□ 0.75
HPS4Q9NQG7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.74■□□□□ 0.75
HPS4Q9NQG7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HPS4Q9NQG7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 HOMER2P1-201ENST00000455653 964 ntBASIC19.73■□□□□ 0.75
HPS4Q9NQG7 AL359075.1-203ENST00000462729 1002 ntBASIC19.73■□□□□ 0.75
HPS4Q9NQG7 FAM86EP-206ENST00000510506 987 ntBASIC19.73■□□□□ 0.75
HPS4Q9NQG7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.73■□□□□ 0.75
HPS4Q9NQG7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
HPS4Q9NQG7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms