Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
A1CFQ9NQ94 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.77■■□□□ 1.07
A1CFQ9NQ94 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
A1CFQ9NQ94 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.77■■□□□ 1.07
A1CFQ9NQ94 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 TSPY21P-201ENST00000433481 731 ntBASIC21.76■■□□□ 1.07
A1CFQ9NQ94 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 AL671277.2-201ENST00000458060 996 ntBASIC21.76■■□□□ 1.07
A1CFQ9NQ94 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 FAM86EP-206ENST00000510506 987 ntBASIC21.76■■□□□ 1.07
A1CFQ9NQ94 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 AL121956.5-201ENST00000625261 221 ntBASIC21.76■■□□□ 1.07
A1CFQ9NQ94 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.76■■□□□ 1.07
A1CFQ9NQ94 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 NEK4P2-201ENST00000580004 1012 ntBASIC21.75■■□□□ 1.07
A1CFQ9NQ94 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 AP000550.4-202ENST00000639755 178 ntBASIC21.75■■□□□ 1.07
A1CFQ9NQ94 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 PKD1P6-201ENST00000343738 4769 ntBASIC21.75■■□□□ 1.07
A1CFQ9NQ94 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A1CFQ9NQ94 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 AP000523.1-201ENST00000398242 1049 ntBASIC21.74■■□□□ 1.07
A1CFQ9NQ94 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.74■■□□□ 1.07
A1CFQ9NQ94 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms