Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 KRT18P61-201ENST00000585825 1298 ntBASIC17.34■□□□□ 0.37
HMG20AQ9NP66 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 RBM17P2-201ENST00000616397 1405 ntBASIC17.34■□□□□ 0.37
HMG20AQ9NP66 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMG20AQ9NP66 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.33■□□□□ 0.37
HMG20AQ9NP66 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 AC019069.1-201ENST00000610008 1333 ntBASIC17.33■□□□□ 0.36
HMG20AQ9NP66 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.33■□□□□ 0.36
HMG20AQ9NP66 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 AC091799.1-201ENST00000422823 811 ntBASIC17.32■□□□□ 0.36
HMG20AQ9NP66 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20AQ9NP66 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 AC034268.1-201ENST00000441047 882 ntBASIC17.31■□□□□ 0.36
HMG20AQ9NP66 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms