Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AC093525.10-201ENST00000625130 1569 ntBASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM1Q9HBL6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 AL031598.1-201ENST00000561511 1773 ntBASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 NBPF21P-201ENST00000425093 1451 ntBASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM1Q9HBL6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 NEFHP1-201ENST00000412845 2629 ntBASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 Z98044.1-201ENST00000632503 1764 ntBASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM1Q9HBL6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 AC008403.3-201ENST00000598924 454 ntBASIC18.35■□□□□ 0.53
LRTM1Q9HBL6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms