Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.25■□□□□ 0.51
PIF1Q9H611 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.25■□□□□ 0.51
PIF1Q9H611 AL390961.4-201ENST00000623958 2535 ntBASIC18.25■□□□□ 0.51
PIF1Q9H611 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.25■□□□□ 0.51
PIF1Q9H611 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PIF1Q9H611 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
PIF1Q9H611 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.25■□□□□ 0.51
PIF1Q9H611 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PIF1Q9H611 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
PIF1Q9H611 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.24■□□□□ 0.51
PIF1Q9H611 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.24■□□□□ 0.51
PIF1Q9H611 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PIF1Q9H611 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.24■□□□□ 0.51
PIF1Q9H611 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PIF1Q9H611 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.23■□□□□ 0.51
PIF1Q9H611 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.23■□□□□ 0.51
PIF1Q9H611 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PIF1Q9H611 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.23■□□□□ 0.51
PIF1Q9H611 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 CROCCP5-201ENST00000436658 830 ntBASIC18.23■□□□□ 0.51
PIF1Q9H611 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.23■□□□□ 0.51
PIF1Q9H611 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.23■□□□□ 0.51
PIF1Q9H611 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
PIF1Q9H611 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 AC090164.3-201ENST00000610780 2143 ntBASIC18.23■□□□□ 0.51
PIF1Q9H611 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.23■□□□□ 0.51
PIF1Q9H611 AC124283.5-201ENST00000624661 1809 ntBASIC18.23■□□□□ 0.51
PIF1Q9H611 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PIF1Q9H611 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.22■□□□□ 0.51
PIF1Q9H611 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PIF1Q9H611 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.22■□□□□ 0.51
PIF1Q9H611 AC006970.2-201ENST00000450065 779 ntBASIC18.22■□□□□ 0.51
PIF1Q9H611 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 AF201337.1-201ENST00000520239 748 ntBASIC18.22■□□□□ 0.51
PIF1Q9H611 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 AL121832.2-201ENST00000610979 668 ntBASIC18.22■□□□□ 0.51
PIF1Q9H611 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PIF1Q9H611 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PIF1Q9H611 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PIF1Q9H611 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.22■□□□□ 0.51
PIF1Q9H611 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
PIF1Q9H611 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 AL031598.1-201ENST00000561511 1773 ntBASIC18.22■□□□□ 0.51
PIF1Q9H611 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 BCL2-203ENST00000589955 5011 ntBASIC18.22■□□□□ 0.51
PIF1Q9H611 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PIF1Q9H611 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PIF1Q9H611 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PIF1Q9H611 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PIF1Q9H611 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.21■□□□□ 0.51
PIF1Q9H611 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms