Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC68Q9H2F9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 AC141586.3-201ENST00000562166 1838 ntBASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC68Q9H2F9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC68Q9H2F9 TEX21P-204ENST00000641479 1693 ntBASIC19.14■□□□□ 0.66
CCDC68Q9H2F9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC68Q9H2F9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 SDHAP1-207ENST00000440850 2000 ntBASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 AL023875.1-201ENST00000640777 796 ntBASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 AC098818.2-201ENST00000564925 2320 ntBASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC68Q9H2F9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 KRASP1-201ENST00000407852 552 ntBASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 CD99P1-205ENST00000527459 561 ntBASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC68Q9H2F9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms