Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.09■□□□□ 0.653e-7■■■■□ 19.6
XRN2Q9H0D6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.37■□□□□ 0.373e-7■■■■□ 19.6
XRN2Q9H0D6 BOP1-204ENST00000569403 651 ntTSL 430.87■■■□□ 2.531e-6■■■■□ 19.6
XRN2Q9H0D6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.612e-9■■■■□ 19.6
XRN2Q9H0D6 ERICH1-207ENST00000522893 3170 ntAPPRIS ALT2 TSL 1 (best)12.68□□□□□ -0.382e-9■■■■□ 19.6
XRN2Q9H0D6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.064e-6■■■■□ 19.6
XRN2Q9H0D6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.014e-6■■■■□ 19.6
XRN2Q9H0D6 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.494e-6■■■■□ 19.6
XRN2Q9H0D6 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.614e-6■■■■□ 19.6
XRN2Q9H0D6 NCOR2-207ENST00000420698 1752 ntTSL 217.94■□□□□ 0.461e-7■■■■□ 19.6
XRN2Q9H0D6 NCOR2-212ENST00000448008 735 ntTSL 516.05■□□□□ 0.161e-7■■■■□ 19.6
XRN2Q9H0D6 NCOR2-224ENST00000542927 828 ntTSL 315.56■□□□□ 0.081e-7■■■■□ 19.6
XRN2Q9H0D6 FAM222B-203ENST00000577376 720 ntTSL 229.12■■■□□ 2.251e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.96■■■□□ 2.231e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.62■■□□□ 1.851e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-206ENST00000579381 462 ntTSL 526.62■■□□□ 1.851e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.6■■□□□ 1.851e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-207ENST00000581229 598 ntTSL 425.08■■□□□ 1.611e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-212ENST00000583307 886 ntTSL 213.05□□□□□ -0.321e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-204ENST00000577513 731 ntTSL 312.15□□□□□ -0.461e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.621e-6■■■■□ 19.6
XRN2Q9H0D6 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC10□□□□□ -0.811e-6■■■■□ 19.6
XRN2Q9H0D6 MATR3-225ENST00000514528 532 ntTSL 420.97■□□□□ 0.954e-16■■■■□ 19.6
XRN2Q9H0D6 MATR3-213ENST00000508689 561 ntTSL 419.28■□□□□ 0.684e-16■■■■□ 19.6
XRN2Q9H0D6 MATR3-210ENST00000504643 2560 ntTSL 29.48□□□□□ -0.894e-16■■■■□ 19.6
XRN2Q9H0D6 RN7SL2-201ENST00000490232 300 ntBASIC15.21■□□□□ 0.031e-323■■■■□ 19.6
XRN2Q9H0D6 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC11.7□□□□□ -0.541e-323■■■■□ 19.6
XRN2Q9H0D6 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC11.48□□□□□ -0.571e-323■■■■□ 19.6
XRN2Q9H0D6 VEZF1-203ENST00000583932 825 ntTSL 521.51■■□□□ 1.031e-23■■■■□ 19.6
XRN2Q9H0D6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.561e-23■■■■□ 19.6
XRN2Q9H0D6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.668e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-212ENST00000520134 592 ntTSL 326.63■■□□□ 1.858e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-211ENST00000520019 831 ntTSL 326.63■■□□□ 1.858e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-221ENST00000523108 1080 ntTSL 526.63■■□□□ 1.858e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-208ENST00000519616 522 ntTSL 525.99■■□□□ 1.758e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-211ENST00000600491 1493 ntTSL 225.21■■□□□ 1.638e-9■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.64■■□□□ 1.548e-9■■■■□ 19.6
XRN2Q9H0D6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.58e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-221ENST00000522361 367 ntTSL 422.52■■□□□ 1.28e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-209ENST00000518879 820 ntTSL 522.44■■□□□ 1.188e-9■■■■□ 19.6
XRN2Q9H0D6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.188e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-219ENST00000521223 587 ntTSL 422.32■■□□□ 1.168e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-207ENST00000518285 507 ntTSL 322.24■■□□□ 1.158e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-205ENST00000518167 421 ntTSL 522.19■■□□□ 1.148e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-203ENST00000518168 1013 ntTSL 222.12■■□□□ 1.138e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.04■■□□□ 1.128e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-204ENST00000393546 671 ntTSL 322.03■■□□□ 1.128e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-217ENST00000521305 1213 ntTSL 521.45■■□□□ 1.028e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-209ENST00000503346 669 ntTSL 221.22■□□□□ 0.998e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.98e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.868e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)20.43■□□□□ 0.868e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-215ENST00000506161 759 ntTSL 320.03■□□□□ 0.88e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.03■□□□□ 0.88e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-210ENST00000503827 451 ntTSL 519.95■□□□□ 0.788e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-213ENST00000505074 931 ntTSL 319.95■□□□□ 0.788e-9■■■■□ 19.6
XRN2Q9H0D6 MGAT4B-222ENST00000523329 543 ntTSL 319.27■□□□□ 0.688e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-210ENST00000519020 573 ntTSL 519.09■□□□□ 0.658e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.598e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.528e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.18■□□□□ 0.58e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)18.11■□□□□ 0.498e-9■■■■□ 19.6
XRN2Q9H0D6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.64■□□□□ 0.418e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.338e-9■■■■□ 19.6
XRN2Q9H0D6 PDLIM7-211ENST00000504318 597 ntTSL 316.77■□□□□ 0.288e-9■■■■□ 19.6
XRN2Q9H0D6 PDIA6-206ENST00000489662 564 ntTSL 415.89■□□□□ 0.138e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-212ENST00000600677 2022 ntTSL 515.87■□□□□ 0.138e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.82■□□□□ 0.128e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.038e-9■■■■□ 19.6
XRN2Q9H0D6 TRIP10-203ENST00000595305 2068 ntTSL 214.79□□□□□ -0.048e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-219ENST00000485001 596 ntTSL 314.21□□□□□ -0.132e-8■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.348e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 212.77□□□□□ -0.372e-8■■■■□ 19.6
XRN2Q9H0D6 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC12.49□□□□□ -0.418e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.422e-8■■■■□ 19.6
XRN2Q9H0D6 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC11.74□□□□□ -0.538e-9■■■■□ 19.6
XRN2Q9H0D6 SSBP3-215ENST00000533946 431 ntTSL 311.52□□□□□ -0.578e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.572e-8■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC11.12□□□□□ -0.638e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-206ENST00000518283 574 ntTSL 410.69□□□□□ -0.78e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)10.49□□□□□ -0.732e-8■■■■□ 19.6
XRN2Q9H0D6 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC10.04□□□□□ -0.88e-9■■■■□ 19.6
XRN2Q9H0D6 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC9.99□□□□□ -0.818e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-227ENST00000523514 533 ntTSL 49□□□□□ -0.978e-9■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.96□□□□□ -0.978e-9■■■■□ 19.6
XRN2Q9H0D6 CIZ1-212ENST00000471773 717 ntTSL 28.93□□□□□ -0.982e-8■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-208ENST00000506286 773 ntTSL 37.52□□□□□ -1.218e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.238e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-228ENST00000523993 581 ntTSL 37.21□□□□□ -1.268e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.648e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-222ENST00000522702 544 ntTSL 44.07□□□□□ -1.768e-9■■■■□ 19.6
XRN2Q9H0D6 FAM49B-225ENST00000523288 4552 ntTSL 23.72□□□□□ -1.818e-9■■■■□ 19.6
XRN2Q9H0D6 ANTXR2-209ENST00000514959 579 ntTSL 22.45□□□□□ -2.028e-9■■■■□ 19.6
XRN2Q9H0D6 FAM169A-205ENST00000513277 803 ntTSL 321.73■■□□□ 1.071e-6■■■■□ 19.6
XRN2Q9H0D6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.63□□□□□ -1.671e-6■■■■□ 19.6
XRN2Q9H0D6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.791e-6■■■■□ 19.6
XRN2Q9H0D6 INTS11-238ENST00000530233 595 ntTSL 418.33■□□□□ 0.523e-6■■■■□ 19.5
XRN2Q9H0D6 DLGAP4-AS1-201ENST00000425233 443 ntTSL 518.56■□□□□ 0.562e-6■■■■□ 19.5
XRN2Q9H0D6 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC15.53■□□□□ 0.082e-6■■■■□ 19.5
Retrieved 100 of 21,068 protein–RNA pairs in 107.9 ms