Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
LRRC3Q9BY71 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC3Q9BY71 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 AC112907.3-201ENST00000577781 2400 ntBASIC19.94■□□□□ 0.78
LRRC3Q9BY71 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 UPK3BP1-201ENST00000428678 509 ntBASIC19.94■□□□□ 0.78
LRRC3Q9BY71 AC009947.2-201ENST00000444014 672 ntBASIC19.94■□□□□ 0.78
LRRC3Q9BY71 AL359075.1-203ENST00000462729 1002 ntBASIC19.94■□□□□ 0.78
LRRC3Q9BY71 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRRC3Q9BY71 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 NEK4P2-201ENST00000580004 1012 ntBASIC19.93■□□□□ 0.78
LRRC3Q9BY71 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC3Q9BY71 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 AP000550.4-202ENST00000639755 178 ntBASIC19.92■□□□□ 0.78
LRRC3Q9BY71 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRRC3Q9BY71 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
LRRC3Q9BY71 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms