Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RSPO3Q9BXY4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RSPO3Q9BXY4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 AC135050.7-201ENST00000624508 2218 ntBASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 KRT18P6-201ENST00000555540 1265 ntBASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RSPO3Q9BXY4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 AC090164.3-201ENST00000610780 2143 ntBASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 ANO7L1-203ENST00000602586 1720 ntBASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RSPO3Q9BXY4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 AC083906.6-201ENST00000641366 219 ntBASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.56■□□□□ 0.4
RSPO3Q9BXY4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 BICD1-207ENST00000551848 1962 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms