Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ABHD17AP6-201ENST00000458502 1044 ntBASIC11.38□□□□□ -0.59
LIMD2Q9BT23 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 SERP1-205ENST00000487153 657 ntTSL 4 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 AC005829.2-201ENST00000571422 1056 ntBASIC11.38□□□□□ -0.59
LIMD2Q9BT23 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LIMD2Q9BT23 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 NCF1B-203ENST00000435988 1254 ntBASIC11.37□□□□□ -0.59
LIMD2Q9BT23 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 AC091874.3-201ENST00000512672 1195 ntBASIC11.37□□□□□ -0.59
LIMD2Q9BT23 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 MARS-234ENST00000630571 216 ntTSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 MARS-235ENST00000630803 183 ntTSL 3 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LIMD2Q9BT23 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 BID-204ENST00000399767 2129 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 TSPY6P-201ENST00000448518 926 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 OR2A1-AS1-201ENST00000462305 773 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 HLA-B-256ENST00000639848 1089 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC133041.1-202ENST00000642053 222 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms