Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.4■□□□□ 0.22
NICN1Q9BSH3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 IRX1P1-201ENST00000438849 1838 ntBASIC16.4■□□□□ 0.22
NICN1Q9BSH3 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.4■□□□□ 0.22
NICN1Q9BSH3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.4■□□□□ 0.22
NICN1Q9BSH3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.39■□□□□ 0.22
NICN1Q9BSH3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NICN1Q9BSH3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NICN1Q9BSH3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC090164.3-201ENST00000610780 2143 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC005332.8-201ENST00000622750 2735 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC073210.2-201ENST00000430369 194 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC105036.2-201ENST00000569468 176 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AL050303.2-201ENST00000619798 666 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 AC006557.6-201ENST00000623071 864 ntBASIC16.39■□□□□ 0.21
NICN1Q9BSH3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NICN1Q9BSH3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AC093525.10-201ENST00000625130 1569 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 Z98044.1-201ENST00000632503 1764 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AL512353.2-201ENST00000448759 1962 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 LETM1P2-201ENST00000597330 2178 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AL390961.4-201ENST00000623958 2535 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AF201337.1-201ENST00000520239 748 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 AC135050.7-201ENST00000624508 2218 ntBASIC16.38■□□□□ 0.21
NICN1Q9BSH3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NICN1Q9BSH3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms