Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.25■□□□□ 0.35
SPENQ96T58 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SPENQ96T58 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 TPSP2-201ENST00000561760 610 ntBASIC17.25■□□□□ 0.35
SPENQ96T58 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 AL162741.1-201ENST00000565563 1558 ntBASIC17.25■□□□□ 0.35
SPENQ96T58 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.25■□□□□ 0.35
SPENQ96T58 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SPENQ96T58 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.25■□□□□ 0.35
SPENQ96T58 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.25■□□□□ 0.35
SPENQ96T58 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SPENQ96T58 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.25■□□□□ 0.35
SPENQ96T58 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SPENQ96T58 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPENQ96T58 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.24■□□□□ 0.35
SPENQ96T58 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPENQ96T58 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
SPENQ96T58 HLA-F-220ENST00000434407 884 ntBASIC17.24■□□□□ 0.35
SPENQ96T58 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.24■□□□□ 0.35
SPENQ96T58 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.24■□□□□ 0.35
SPENQ96T58 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.24■□□□□ 0.35
SPENQ96T58 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
SPENQ96T58 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.24■□□□□ 0.35
SPENQ96T58 AL160286.2-201ENST00000567150 934 ntBASIC17.24■□□□□ 0.35
SPENQ96T58 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.24■□□□□ 0.35
SPENQ96T58 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.24■□□□□ 0.35
SPENQ96T58 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPENQ96T58 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPENQ96T58 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
SPENQ96T58 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
SPENQ96T58 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
SPENQ96T58 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SPENQ96T58 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 AL022342.1-201ENST00000400363 863 ntBASIC17.23■□□□□ 0.35
SPENQ96T58 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SPENQ96T58 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.23■□□□□ 0.35
SPENQ96T58 RASA4DP-201ENST00000460726 1199 ntBASIC17.23■□□□□ 0.35
SPENQ96T58 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SPENQ96T58 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.23■□□□□ 0.35
SPENQ96T58 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.23■□□□□ 0.35
SPENQ96T58 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPENQ96T58 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.23■□□□□ 0.35
SPENQ96T58 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.23■□□□□ 0.35
SPENQ96T58 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.23■□□□□ 0.35
SPENQ96T58 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.23■□□□□ 0.35
SPENQ96T58 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 AC092720.2-201ENST00000602388 1665 ntBASIC17.22■□□□□ 0.35
SPENQ96T58 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 KRT16P6-202ENST00000425692 1426 ntBASIC17.22■□□□□ 0.35
SPENQ96T58 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.22■□□□□ 0.35
SPENQ96T58 AC092329.2-201ENST00000598402 547 ntBASIC17.22■□□□□ 0.35
SPENQ96T58 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SPENQ96T58 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPENQ96T58 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms