Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.13■□□□□ 0.49
BBS4Q96RK4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BBS4Q96RK4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 HLA-A-209ENST00000638375 975 ntBASIC18.12■□□□□ 0.49
BBS4Q96RK4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BBS4Q96RK4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
BBS4Q96RK4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 AL161938.1-201ENST00000569833 2180 ntBASIC18.11■□□□□ 0.49
BBS4Q96RK4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
BBS4Q96RK4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BBS4Q96RK4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BBS4Q96RK4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BBS4Q96RK4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 KRT18P29-201ENST00000397031 1267 ntBASIC18.09■□□□□ 0.49
BBS4Q96RK4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BBS4Q96RK4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BBS4Q96RK4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
BBS4Q96RK4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms