Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC47A1Q96FL8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 SLC29A4P1-201ENST00000398760 971 ntBASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 AL390719.1-204ENST00000412397 1219 ntBASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 TFP1-202ENST00000475455 1573 ntBASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SLC47A1Q96FL8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.02■□□□□ 0.47
SLC47A1Q96FL8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 BICD1-207ENST00000551848 1962 ntBASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC47A1Q96FL8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18■□□□□ 0.47
SLC47A1Q96FL8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 AC092118.2-201ENST00000613495 667 ntBASIC18■□□□□ 0.47
SLC47A1Q96FL8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 AL354751.1-201ENST00000412768 1863 ntBASIC18■□□□□ 0.47
SLC47A1Q96FL8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC47A1Q96FL8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18■□□□□ 0.47
SLC47A1Q96FL8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC47A1Q96FL8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC47A1Q96FL8 AL133373.2-201ENST00000623187 2828 ntBASIC17.99■□□□□ 0.47
SLC47A1Q96FL8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC47A1Q96FL8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms