Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 GCSHP5-201ENST00000443090 522 ntBASIC19.66■□□□□ 0.74
HDAC11Q96DB2 KSR1P1-201ENST00000446298 240 ntBASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AP002982.1-201ENST00000492365 877 ntBASIC19.66■□□□□ 0.74
HDAC11Q96DB2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 Z85996.1-201ENST00000494644 937 ntBASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AC142381.4-202ENST00000563973 229 ntBASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.66■□□□□ 0.74
HDAC11Q96DB2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 AC004980.1-204ENST00000429707 299 ntBASIC19.65■□□□□ 0.74
HDAC11Q96DB2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 TSPY21P-201ENST00000433481 731 ntBASIC19.65■□□□□ 0.74
HDAC11Q96DB2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 AP000974.1-201ENST00000623909 2387 ntBASIC19.65■□□□□ 0.74
HDAC11Q96DB2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 KRT8P41-201ENST00000533985 1514 ntBASIC19.65■□□□□ 0.74
HDAC11Q96DB2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC11Q96DB2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC11Q96DB2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 RPS2P4-201ENST00000476944 856 ntBASIC19.64■□□□□ 0.73
HDAC11Q96DB2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 AF186192.3-201ENST00000583427 947 ntBASIC19.64■□□□□ 0.73
HDAC11Q96DB2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC11Q96DB2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 IRX1P1-201ENST00000438849 1838 ntBASIC19.63■□□□□ 0.73
HDAC11Q96DB2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC11Q96DB2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms