Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3S1Q92572 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 AC131281.2-201ENST00000520478 145 ntBASIC16.85■□□□□ 0.29
AP3S1Q92572 AL136162.1-201ENST00000607711 1078 ntBASIC16.85■□□□□ 0.29
AP3S1Q92572 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S1Q92572 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
AP3S1Q92572 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP3S1Q92572 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
AP3S1Q92572 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
AP3S1Q92572 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 AC104187.1-201ENST00000607510 612 ntBASIC16.84■□□□□ 0.29
AP3S1Q92572 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 AC008764.6-201ENST00000595909 2069 ntBASIC16.84■□□□□ 0.29
AP3S1Q92572 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3S1Q92572 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3S1Q92572 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3S1Q92572 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP3S1Q92572 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP3S1Q92572 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3S1Q92572 IRS3P-201ENST00000223076 1006 ntBASIC16.83■□□□□ 0.28
AP3S1Q92572 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
AP3S1Q92572 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
AP3S1Q92572 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S1Q92572 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3S1Q92572 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S1Q92572 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3S1Q92572 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP3S1Q92572 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.83■□□□□ 0.28
AP3S1Q92572 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S1Q92572 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S1Q92572 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3S1Q92572 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S1Q92572 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S1Q92572 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
AP3S1Q92572 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
AP3S1Q92572 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP3S1Q92572 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3S1Q92572 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S1Q92572 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
AP3S1Q92572 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3S1Q92572 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
AP3S1Q92572 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S1Q92572 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP3S1Q92572 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms