Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.38■□□□□ 0.85
DDX1Q92499 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 HTR7P1-201ENST00000538670 1336 ntBASIC20.38■□□□□ 0.85
DDX1Q92499 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.38■□□□□ 0.85
DDX1Q92499 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 AL049597.2-201ENST00000565575 961 ntBASIC20.38■□□□□ 0.85
DDX1Q92499 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX1Q92499 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
DDX1Q92499 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX1Q92499 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX1Q92499 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX1Q92499 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX1Q92499 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX1Q92499 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX1Q92499 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.37■□□□□ 0.85
DDX1Q92499 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 AC004980.1-204ENST00000429707 299 ntBASIC20.37■□□□□ 0.85
DDX1Q92499 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.37■□□□□ 0.85
DDX1Q92499 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.37■□□□□ 0.85
DDX1Q92499 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX1Q92499 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
DDX1Q92499 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX1Q92499 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX1Q92499 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DDX1Q92499 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DDX1Q92499 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DDX1Q92499 TSPY21P-201ENST00000433481 731 ntBASIC20.36■□□□□ 0.85
DDX1Q92499 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX1Q92499 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.36■□□□□ 0.85
DDX1Q92499 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX1Q92499 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.36■□□□□ 0.85
DDX1Q92499 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.36■□□□□ 0.85
DDX1Q92499 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX1Q92499 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX1Q92499 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.36■□□□□ 0.85
DDX1Q92499 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX1Q92499 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX1Q92499 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX1Q92499 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.35■□□□□ 0.85
DDX1Q92499 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DDX1Q92499 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DDX1Q92499 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DDX1Q92499 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX1Q92499 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms