Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 AC104417.2-201ENST00000562989 1793 ntBASIC19.16■□□□□ 0.66
HMGB4Q8WW32 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGB4Q8WW32 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 AL450487.1-201ENST00000426799 995 ntBASIC19.15■□□□□ 0.66
HMGB4Q8WW32 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.15■□□□□ 0.66
HMGB4Q8WW32 CR769767.2-201ENST00000622735 460 ntBASIC19.15■□□□□ 0.66
HMGB4Q8WW32 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGB4Q8WW32 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.14■□□□□ 0.66
HMGB4Q8WW32 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.14■□□□□ 0.66
HMGB4Q8WW32 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
HMGB4Q8WW32 GABARAPL3-202ENST00000624044 1851 ntBASIC19.14■□□□□ 0.65
HMGB4Q8WW32 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 TPM4P1-201ENST00000436100 807 ntBASIC19.14■□□□□ 0.65
HMGB4Q8WW32 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.14■□□□□ 0.65
HMGB4Q8WW32 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGB4Q8WW32 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 ZNF815P-204ENST00000434898 1737 ntBASIC19.13■□□□□ 0.65
HMGB4Q8WW32 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 AC099778.1-201ENST00000568593 1911 ntBASIC19.13■□□□□ 0.65
HMGB4Q8WW32 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGB4Q8WW32 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms