Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 TERF1P2-201ENST00000583350 1212 ntBASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 LINC00896-202ENST00000609602 2128 ntBASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.35■□□□□ 0.21
SMIM4Q8WVI0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 AC012313.1-201ENST00000593393 3059 ntBASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 AC096631.2-201ENST00000436136 790 ntBASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 AC016405.3-201ENST00000607710 860 ntBASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM4Q8WVI0 GNAS-203ENST00000306120 1878 ntBASIC16.33■□□□□ 0.21
SMIM4Q8WVI0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMIM4Q8WVI0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.33■□□□□ 0.21
SMIM4Q8WVI0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
SMIM4Q8WVI0 AC126763.1-201ENST00000552015 2118 ntBASIC16.33■□□□□ 0.21
SMIM4Q8WVI0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM4Q8WVI0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM4Q8WVI0 SIRPAP1-201ENST00000448467 1770 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms