Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AF201337.1-201ENST00000520239 748 ntBASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AC006557.6-201ENST00000623071 864 ntBASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 AC120498.9-201ENST00000339021 3867 ntBASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.73■□□□□ 0.27
RPS4Y2Q8TD47 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 HLA-L-209ENST00000420110 1011 ntBASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPS4Y2Q8TD47 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 SLC29A4P1-201ENST00000398760 971 ntBASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 AC105036.2-201ENST00000569468 176 ntBASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 AL109923.1-201ENST00000618799 583 ntBASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.71■□□□□ 0.27
RPS4Y2Q8TD47 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPS4Y2Q8TD47 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPS4Y2Q8TD47 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPS4Y2Q8TD47 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RPS4Y2Q8TD47 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ABALON-201ENST00000629058 1903 ntBASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RPS4Y2Q8TD47 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms