Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 INGX-201ENST00000359239 846 ntBASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 AC004951.3-201ENST00000418645 1148 ntBASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 AC063952.2-201ENST00000498792 1227 ntBASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.66■■□□□ 1.22
NKX2-3Q8TAU0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 TSPY23P-201ENST00000440136 739 ntBASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 AP000692.2-201ENST00000608391 879 ntBASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 FSCN1P1-201ENST00000568912 1481 ntBASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.65■■□□□ 1.22
NKX2-3Q8TAU0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 AL049812.1-201ENST00000432563 2267 ntBASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.64■■□□□ 1.22
NKX2-3Q8TAU0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 AC026396.1-201ENST00000419388 421 ntBASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 EGLN1P1-201ENST00000531623 762 ntBASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.64■■□□□ 1.21
NKX2-3Q8TAU0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NKX2-3Q8TAU0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 AC009947.2-201ENST00000444014 672 ntBASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 AC128688.1-201ENST00000487626 519 ntBASIC22.62■■□□□ 1.21
NKX2-3Q8TAU0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms