Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 AC005829.2-201ENST00000571422 1056 ntBASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 AL121832.2-201ENST00000610979 668 ntBASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DNAAF1Q8NEP3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 MIPEPP3-201ENST00000412105 444 ntBASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CROCCP5-201ENST00000436658 830 ntBASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 AC092118.2-201ENST00000613495 667 ntBASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 FP475955.4-201ENST00000623131 1990 ntBASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DNAAF1Q8NEP3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 TFP1-202ENST00000475455 1573 ntBASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.79■□□□□ 0.28
DNAAF1Q8NEP3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 AL390961.4-201ENST00000623958 2535 ntBASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms