Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 AC239809.2-201ENST00000415381 517 ntBASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 TSPY21P-201ENST00000433481 731 ntBASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 AL023875.1-201ENST00000640777 796 ntBASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LSMEM1Q8N8F7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 RN7SL471P-201ENST00000580476 299 ntBASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 NEFHP1-201ENST00000412845 2629 ntBASIC17.49■□□□□ 0.39
LSMEM1Q8N8F7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 KRASP1-201ENST00000407852 552 ntBASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 AC124016.1-201ENST00000609552 612 ntBASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LSMEM1Q8N8F7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LSMEM1Q8N8F7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms