Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00311Q8N616 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00311Q8N616 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 AC011506.1-201ENST00000474329 610 ntBASIC15.5■□□□□ 0.07
LINC00311Q8N616 AC116562.2-201ENST00000507042 360 ntBASIC15.5■□□□□ 0.07
LINC00311Q8N616 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LINC00311Q8N616 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00311Q8N616 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 AC006333.2-201ENST00000607957 2099 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 MESTP1-201ENST00000404287 994 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 NUDT16P1-203ENST00000513809 620 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 AP000692.2-201ENST00000608391 879 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 DGCR10-201ENST00000609839 495 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 AC113410.3-201ENST00000623366 203 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 AL049637.2-201ENST00000641778 930 ntBASIC15.49■□□□□ 0.07
LINC00311Q8N616 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00311Q8N616 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00311Q8N616 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00311Q8N616 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.48■□□□□ 0.07
LINC00311Q8N616 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC00311Q8N616 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LINC00311Q8N616 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms