Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 CCR12P-201ENST00000446203 998 ntBASIC17.72■□□□□ 0.43
BEST3Q8N1M1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 AC087289.5-201ENST00000586076 3175 ntBASIC17.72■□□□□ 0.43
BEST3Q8N1M1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST3Q8N1M1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.72■□□□□ 0.43
BEST3Q8N1M1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.71■□□□□ 0.43
BEST3Q8N1M1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 AIRN-201ENST00000601203 4374 ntBASIC17.71■□□□□ 0.43
BEST3Q8N1M1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.71■□□□□ 0.43
BEST3Q8N1M1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 AL445228.2-201ENST00000605589 952 ntBASIC17.71■□□□□ 0.43
BEST3Q8N1M1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST3Q8N1M1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST3Q8N1M1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.71■□□□□ 0.42
BEST3Q8N1M1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST3Q8N1M1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BEST3Q8N1M1 HMGA1P5-201ENST00000412453 271 ntBASIC17.69■□□□□ 0.42
BEST3Q8N1M1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms