Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 SLC25A1P4-201ENST00000567977 778 ntBASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC146Q8IYE0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 FP475955.4-201ENST00000623131 1990 ntBASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 AC097488.1-201ENST00000507834 756 ntBASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
CCDC146Q8IYE0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.64
CCDC146Q8IYE0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCDC146Q8IYE0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC146Q8IYE0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 MIR1238-201ENST00000408483 83 ntBASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CCDC146Q8IYE0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 UNC93B2-201ENST00000285383 730 ntBASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 CRYGFP-201ENST00000418459 633 ntBASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms