Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KRT18P31-201ENST00000506277 1292 ntBASIC23.33■■□□□ 1.33
SLX4Q8IY92 AC106795.1-205ENST00000512851 1056 ntBASIC23.33■■□□□ 1.33
SLX4Q8IY92 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLX4Q8IY92 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.33■■□□□ 1.33
SLX4Q8IY92 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLX4Q8IY92 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLX4Q8IY92 AL023284.2-201ENST00000405850 579 ntBASIC23.33■■□□□ 1.32
SLX4Q8IY92 AP000867.3-201ENST00000524675 377 ntBASIC23.33■■□□□ 1.32
SLX4Q8IY92 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.33■■□□□ 1.32
SLX4Q8IY92 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLX4Q8IY92 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SLX4Q8IY92 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.32■■□□□ 1.32
SLX4Q8IY92 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.32■■□□□ 1.32
SLX4Q8IY92 MIR3917-201ENST00000580971 93 ntBASIC23.32■■□□□ 1.32
SLX4Q8IY92 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SLX4Q8IY92 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.32■■□□□ 1.32
SLX4Q8IY92 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.32■■□□□ 1.32
SLX4Q8IY92 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 FOSL1P1-201ENST00000511041 816 ntBASIC23.31■■□□□ 1.32
SLX4Q8IY92 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 AC074051.2-201ENST00000565115 352 ntBASIC23.31■■□□□ 1.32
SLX4Q8IY92 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SLX4Q8IY92 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 LINC00167-201ENST00000530583 1419 ntBASIC23.31■■□□□ 1.32
SLX4Q8IY92 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLX4Q8IY92 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
SLX4Q8IY92 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLX4Q8IY92 HLA-A-201ENST00000376802 1334 ntBASIC23.29■■□□□ 1.32
SLX4Q8IY92 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.29■■□□□ 1.32
SLX4Q8IY92 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 AC138894.3-201ENST00000603787 634 ntBASIC23.29■■□□□ 1.32
SLX4Q8IY92 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SLX4Q8IY92 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.29■■□□□ 1.32
SLX4Q8IY92 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 KRT16P4-201ENST00000453883 522 ntBASIC23.28■■□□□ 1.32
SLX4Q8IY92 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms