Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 AL160286.2-201ENST00000567150 934 ntBASIC17.67■□□□□ 0.42
VRK2Q86Y07 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 AL138781.2-201ENST00000617896 1843 ntBASIC17.67■□□□□ 0.42
VRK2Q86Y07 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.67■□□□□ 0.42
VRK2Q86Y07 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VRK2Q86Y07 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 AC239809.2-201ENST00000415381 517 ntBASIC17.66■□□□□ 0.42
VRK2Q86Y07 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VRK2Q86Y07 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VRK2Q86Y07 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 AC020763.4-201ENST00000623414 4170 ntBASIC17.65■□□□□ 0.42
VRK2Q86Y07 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VRK2Q86Y07 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
VRK2Q86Y07 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VRK2Q86Y07 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.42
VRK2Q86Y07 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.64■□□□□ 0.42
VRK2Q86Y07 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
VRK2Q86Y07 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VRK2Q86Y07 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.42
VRK2Q86Y07 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.64■□□□□ 0.42
VRK2Q86Y07 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms