Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.33■□□□□ 0.21
RAI1Q7Z5J4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 HBZP1-201ENST00000354915 429 ntBASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI1Q7Z5J4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI1Q7Z5J4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 SLC25A24-204ENST00000569674 2357 ntBASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 AC036111.1-201ENST00000533973 1582 ntBASIC16.31■□□□□ 0.2
RAI1Q7Z5J4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAI1Q7Z5J4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms