Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHMP1BQ7LBR1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 AF186192.3-201ENST00000583427 947 ntBASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 MIR4785-201ENST00000585005 73 ntBASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 AC073195.1-201ENST00000607241 877 ntBASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHMP1BQ7LBR1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
CHMP1BQ7LBR1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CHMP1BQ7LBR1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms