Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HLA-F-220ENST00000434407 884 ntBASIC20.58■□□□□ 0.89
CNKSR3Q6P9H4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.58■□□□□ 0.89
CNKSR3Q6P9H4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.58■□□□□ 0.89
CNKSR3Q6P9H4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.58■□□□□ 0.89
CNKSR3Q6P9H4 AL162377.1-201ENST00000618844 1793 ntBASIC20.58■□□□□ 0.89
CNKSR3Q6P9H4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNKSR3Q6P9H4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNKSR3Q6P9H4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 AL136038.4-201ENST00000603606 1261 ntBASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 IFNL4P1-201ENST00000607083 540 ntBASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 AL157888.1-201ENST00000631930 593 ntBASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNKSR3Q6P9H4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 PVRIG2P-201ENST00000435460 978 ntBASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 AC112497.1-201ENST00000624824 639 ntBASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
CNKSR3Q6P9H4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 KRT18P1-202ENST00000452408 1331 ntBASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 MIR662-201ENST00000384847 95 ntBASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNKSR3Q6P9H4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms