Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 KRT8P8-201ENST00000434750 1448 ntBASIC20.03■□□□□ 0.8
RNF43Q68DV7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 RBM17P1-201ENST00000453646 1190 ntBASIC20.03■□□□□ 0.8
RNF43Q68DV7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 CR392000.1-201ENST00000624770 1228 ntBASIC20.03■□□□□ 0.8
RNF43Q68DV7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF43Q68DV7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF43Q68DV7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 AL031985.4-201ENST00000642138 673 ntBASIC20.02■□□□□ 0.8
RNF43Q68DV7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF43Q68DV7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF43Q68DV7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF43Q68DV7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF43Q68DV7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF43Q68DV7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF43Q68DV7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF43Q68DV7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF43Q68DV7 AC079598.2-202ENST00000546624 1451 ntBASIC20■□□□□ 0.79
RNF43Q68DV7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF43Q68DV7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20■□□□□ 0.79
RNF43Q68DV7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
RNF43Q68DV7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20■□□□□ 0.79
RNF43Q68DV7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20■□□□□ 0.79
RNF43Q68DV7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20■□□□□ 0.79
RNF43Q68DV7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RNF43Q68DV7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF43Q68DV7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20■□□□□ 0.79
RNF43Q68DV7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20■□□□□ 0.79
RNF43Q68DV7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF43Q68DV7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms