Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.25■□□□□ 0.83
VARS2Q5ST30 TPM4P1-201ENST00000436100 807 ntBASIC20.25■□□□□ 0.83
VARS2Q5ST30 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 AL441883.1-201ENST00000566170 1045 ntBASIC20.25■□□□□ 0.83
VARS2Q5ST30 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 AC125437.2-201ENST00000625180 2167 ntBASIC20.25■□□□□ 0.83
VARS2Q5ST30 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VARS2Q5ST30 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
VARS2Q5ST30 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.24■□□□□ 0.83
VARS2Q5ST30 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
VARS2Q5ST30 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VARS2Q5ST30 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 AC009947.2-201ENST00000444014 672 ntBASIC20.23■□□□□ 0.83
VARS2Q5ST30 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VARS2Q5ST30 AC008622.2-201ENST00000617006 1229 ntBASIC20.23■□□□□ 0.83
VARS2Q5ST30 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.23■□□□□ 0.83
VARS2Q5ST30 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
VARS2Q5ST30 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 AL031133.1-201ENST00000406807 723 ntBASIC20.22■□□□□ 0.83
VARS2Q5ST30 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
VARS2Q5ST30 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
VARS2Q5ST30 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.21■□□□□ 0.83
VARS2Q5ST30 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VARS2Q5ST30 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VARS2Q5ST30 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARS2Q5ST30 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VARS2Q5ST30 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
VARS2Q5ST30 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms