Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 ECEL1P3-201ENST00000427961 737 ntBASIC21.73■■□□□ 1.07
LONRF3Q496Y0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 AC113410.3-201ENST00000623366 203 ntBASIC21.73■■□□□ 1.07
LONRF3Q496Y0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 FP475955.4-201ENST00000623131 1990 ntBASIC21.73■■□□□ 1.07
LONRF3Q496Y0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
LONRF3Q496Y0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 AC120498.9-201ENST00000339021 3867 ntBASIC21.72■■□□□ 1.07
LONRF3Q496Y0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LONRF3Q496Y0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LONRF3Q496Y0 NBPF21P-201ENST00000425093 1451 ntBASIC21.71■■□□□ 1.07
LONRF3Q496Y0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.7■■□□□ 1.07
LONRF3Q496Y0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LONRF3Q496Y0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.7■■□□□ 1.06
LONRF3Q496Y0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 REXO1L12P-201ENST00000622156 912 ntBASIC21.7■■□□□ 1.06
LONRF3Q496Y0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 AL138781.2-201ENST00000617896 1843 ntBASIC21.7■■□□□ 1.06
LONRF3Q496Y0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LONRF3Q496Y0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.69■■□□□ 1.06
LONRF3Q496Y0 AC073912.3-201ENST00000624414 853 ntBASIC21.69■■□□□ 1.06
LONRF3Q496Y0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms