Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ERCC6LQ2NKX8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 CCDC92B-201ENST00000575506 885 ntBASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 AC084018.2-201ENST00000613093 2607 ntBASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 CYP21A1P-202ENST00000354927 1481 ntBASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ERCC6LQ2NKX8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 AC080080.1-201ENST00000625121 2420 ntBASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 AP001330.3-201ENST00000520123 633 ntBASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 AP001160.3-201ENST00000601484 763 ntBASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERCC6LQ2NKX8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 AF213884.3-201ENST00000563833 479 ntBASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 AC104187.1-201ENST00000607510 612 ntBASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ERCC6LQ2NKX8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 AC091305.1-201ENST00000479476 895 ntBASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERCC6LQ2NKX8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms