Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.28■□□□□ 0.52
CFHR1Q03591 TREX1-205ENST00000625293 1783 ntBASIC18.28■□□□□ 0.52
CFHR1Q03591 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
CFHR1Q03591 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 TSPY21P-201ENST00000433481 731 ntBASIC18.28■□□□□ 0.52
CFHR1Q03591 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 AC006538.3-201ENST00000612495 578 ntBASIC18.28■□□□□ 0.52
CFHR1Q03591 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.28■□□□□ 0.52
CFHR1Q03591 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.28■□□□□ 0.52
CFHR1Q03591 PCDHAC2-203ENST00000615316 3011 ntBASIC18.28■□□□□ 0.52
CFHR1Q03591 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CFHR1Q03591 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CFHR1Q03591 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.28■□□□□ 0.52
CFHR1Q03591 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFHR1Q03591 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CFHR1Q03591 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CFHR1Q03591 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.27■□□□□ 0.52
CFHR1Q03591 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.27■□□□□ 0.52
CFHR1Q03591 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CFHR1Q03591 CR769767.2-201ENST00000622735 460 ntBASIC18.27■□□□□ 0.52
CFHR1Q03591 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFHR1Q03591 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CFHR1Q03591 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.27■□□□□ 0.52
CFHR1Q03591 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR1Q03591 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CFHR1Q03591 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.27■□□□□ 0.51
CFHR1Q03591 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR1Q03591 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR1Q03591 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.27■□□□□ 0.51
CFHR1Q03591 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CFHR1Q03591 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.27■□□□□ 0.51
CFHR1Q03591 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.26■□□□□ 0.51
CFHR1Q03591 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.26■□□□□ 0.51
CFHR1Q03591 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.26■□□□□ 0.51
CFHR1Q03591 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.26■□□□□ 0.51
CFHR1Q03591 AP000593.1-201ENST00000393668 712 ntBASIC18.26■□□□□ 0.51
CFHR1Q03591 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.26■□□□□ 0.51
CFHR1Q03591 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.26■□□□□ 0.51
CFHR1Q03591 GCSHP2-201ENST00000560971 527 ntBASIC18.26■□□□□ 0.51
CFHR1Q03591 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.26■□□□□ 0.51
CFHR1Q03591 AC069148.1-201ENST00000608741 768 ntBASIC18.26■□□□□ 0.51
CFHR1Q03591 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.26■□□□□ 0.51
CFHR1Q03591 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.26■□□□□ 0.51
CFHR1Q03591 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFHR1Q03591 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.26■□□□□ 0.51
CFHR1Q03591 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.26■□□□□ 0.51
CFHR1Q03591 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
CFHR1Q03591 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 AC246785.2-201ENST00000432512 513 ntBASIC18.25■□□□□ 0.51
CFHR1Q03591 AL671277.2-201ENST00000458060 996 ntBASIC18.25■□□□□ 0.51
CFHR1Q03591 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.25■□□□□ 0.51
CFHR1Q03591 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 NEK4P2-201ENST00000580004 1012 ntBASIC18.25■□□□□ 0.51
CFHR1Q03591 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.25■□□□□ 0.51
CFHR1Q03591 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.25■□□□□ 0.51
CFHR1Q03591 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFHR1Q03591 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms