Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 AL732292.2-201ENST00000609649 430 ntBASIC20.34■□□□□ 0.85
HTRA4P83105 AL031008.1-201ENST00000619963 541 ntBASIC20.34■□□□□ 0.85
HTRA4P83105 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA4P83105 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HTRA4P83105 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA4P83105 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTRA4P83105 AL391807.1-203ENST00000604392 2365 ntBASIC20.34■□□□□ 0.85
HTRA4P83105 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HTRA4P83105 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA4P83105 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 AC073314.1-201ENST00000568729 2216 ntBASIC20.33■□□□□ 0.85
HTRA4P83105 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA4P83105 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTRA4P83105 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.33■□□□□ 0.85
HTRA4P83105 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA4P83105 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.33■□□□□ 0.85
HTRA4P83105 MCCD1P1-208ENST00000445732 328 ntBASIC20.33■□□□□ 0.85
HTRA4P83105 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HTRA4P83105 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.33■□□□□ 0.85
HTRA4P83105 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HTRA4P83105 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.33■□□□□ 0.85
HTRA4P83105 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.33■□□□□ 0.85
HTRA4P83105 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HTRA4P83105 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HTRA4P83105 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.33■□□□□ 0.84
HTRA4P83105 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.33■□□□□ 0.84
HTRA4P83105 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HTRA4P83105 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.32■□□□□ 0.84
HTRA4P83105 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.32■□□□□ 0.84
HTRA4P83105 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA4P83105 AL160237.2-201ENST00000556165 472 ntBASIC20.32■□□□□ 0.84
HTRA4P83105 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HTRA4P83105 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA4P83105 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA4P83105 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HTRA4P83105 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.31■□□□□ 0.84
HTRA4P83105 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.31■□□□□ 0.84
HTRA4P83105 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA4P83105 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.31■□□□□ 0.84
HTRA4P83105 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.31■□□□□ 0.84
HTRA4P83105 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.31■□□□□ 0.84
HTRA4P83105 AL121772.3-201ENST00000610840 674 ntBASIC20.31■□□□□ 0.84
HTRA4P83105 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HTRA4P83105 AC112497.1-201ENST00000624824 639 ntBASIC20.31■□□□□ 0.84
HTRA4P83105 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.31■□□□□ 0.84
HTRA4P83105 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HTRA4P83105 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA4P83105 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HTRA4P83105 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA4P83105 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
HTRA4P83105 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HTRA4P83105 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA4P83105 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA4P83105 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.3■□□□□ 0.84
HTRA4P83105 AC091304.2-201ENST00000564639 760 ntBASIC20.3■□□□□ 0.84
HTRA4P83105 RNF126P1-202ENST00000569893 925 ntBASIC20.3■□□□□ 0.84
HTRA4P83105 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA4P83105 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA4P83105 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms