Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM4P67936 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM4P67936 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM4P67936 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM4P67936 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM4P67936 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM4P67936 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM4P67936 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM4P67936 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.41■■□□□ 1.02
TPM4P67936 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.41■■□□□ 1.02
TPM4P67936 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.41■■□□□ 1.02
TPM4P67936 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.41■■□□□ 1.02
TPM4P67936 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 BID-214ENST00000617586 542 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TPM4P67936 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM4P67936 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.41■■□□□ 1.02
TPM4P67936 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM4P67936 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TPM4P67936 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.4■■□□□ 1.02
TPM4P67936 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.4■■□□□ 1.02
TPM4P67936 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.4■■□□□ 1.02
TPM4P67936 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TPM4P67936 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM4P67936 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TPM4P67936 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TPM4P67936 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.39■■□□□ 1.02
TPM4P67936 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.39■■□□□ 1.02
TPM4P67936 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TPM4P67936 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
TPM4P67936 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 GPX1P1-201ENST00000388829 606 ntBASIC21.39■■□□□ 1.01
TPM4P67936 AL512625.2-201ENST00000417533 625 ntBASIC21.39■■□□□ 1.01
TPM4P67936 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.39■■□□□ 1.01
TPM4P67936 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TPM4P67936 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.39■■□□□ 1.01
TPM4P67936 AL512353.2-201ENST00000448759 1962 ntBASIC21.39■■□□□ 1.01
TPM4P67936 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.39■■□□□ 1.01
TPM4P67936 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TPM4P67936 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.39■■□□□ 1.01
TPM4P67936 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TPM4P67936 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM4P67936 AC104417.2-201ENST00000562989 1793 ntBASIC21.38■■□□□ 1.01
TPM4P67936 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM4P67936 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM4P67936 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.38■■□□□ 1.01
TPM4P67936 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.38■■□□□ 1.01
TPM4P67936 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TPM4P67936 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms