Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.36
RPS4XP62701 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RPS4XP62701 KRT17P2-201ENST00000300992 1314 ntBASIC17.27■□□□□ 0.36
RPS4XP62701 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 KRASP1-201ENST00000407852 552 ntBASIC17.27■□□□□ 0.36
RPS4XP62701 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RPS4XP62701 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.27■□□□□ 0.36
RPS4XP62701 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.27■□□□□ 0.36
RPS4XP62701 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS4XP62701 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS4XP62701 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4XP62701 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4XP62701 AC093525.10-201ENST00000625130 1569 ntBASIC17.27■□□□□ 0.35
RPS4XP62701 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4XP62701 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4XP62701 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPS4XP62701 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPS4XP62701 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS4XP62701 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.26■□□□□ 0.35
RPS4XP62701 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.26■□□□□ 0.35
RPS4XP62701 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RPS4XP62701 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPS4XP62701 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.26■□□□□ 0.35
RPS4XP62701 HLA-A-209ENST00000638375 975 ntBASIC17.26■□□□□ 0.35
RPS4XP62701 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RPS4XP62701 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.26■□□□□ 0.35
RPS4XP62701 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS4XP62701 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPS4XP62701 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS4XP62701 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
RPS4XP62701 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.25■□□□□ 0.35
RPS4XP62701 REXO1L12P-201ENST00000622156 912 ntBASIC17.25■□□□□ 0.35
RPS4XP62701 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.25■□□□□ 0.35
RPS4XP62701 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS4XP62701 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPS4XP62701 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS4XP62701 AL031598.1-201ENST00000561511 1773 ntBASIC17.25■□□□□ 0.35
RPS4XP62701 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RPS4XP62701 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RPS4XP62701 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RPS4XP62701 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
RPS4XP62701 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms