Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.8■□□□□ 0.92
SNRPFP62306 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.8■□□□□ 0.92
SNRPFP62306 MIR4497-201ENST00000583208 89 ntBASIC20.8■□□□□ 0.92
SNRPFP62306 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SNRPFP62306 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.8■□□□□ 0.92
SNRPFP62306 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.8■□□□□ 0.92
SNRPFP62306 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
SNRPFP62306 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.8■□□□□ 0.92
SNRPFP62306 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SNRPFP62306 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRPFP62306 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.8■□□□□ 0.92
SNRPFP62306 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNRPFP62306 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.79■□□□□ 0.92
SNRPFP62306 KRT8P3-201ENST00000519669 1449 ntBASIC20.79■□□□□ 0.92
SNRPFP62306 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.79■□□□□ 0.92
SNRPFP62306 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRPFP62306 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.79■□□□□ 0.92
SNRPFP62306 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRPFP62306 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.79■□□□□ 0.92
SNRPFP62306 AP005242.2-201ENST00000580065 1175 ntBASIC20.79■□□□□ 0.92
SNRPFP62306 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRPFP62306 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SNRPFP62306 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNRPFP62306 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.79■□□□□ 0.92
SNRPFP62306 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNRPFP62306 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRPFP62306 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.78■□□□□ 0.92
SNRPFP62306 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRPFP62306 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SNRPFP62306 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SNRPFP62306 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRPFP62306 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SNRPFP62306 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.77■□□□□ 0.92
SNRPFP62306 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 UNC93B2-201ENST00000285383 730 ntBASIC20.77■□□□□ 0.92
SNRPFP62306 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SNRPFP62306 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.77■□□□□ 0.92
SNRPFP62306 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 TSPY7P-201ENST00000431358 1114 ntBASIC20.77■□□□□ 0.92
SNRPFP62306 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.77■□□□□ 0.92
SNRPFP62306 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 CA15P1-201ENST00000481698 905 ntBASIC20.77■□□□□ 0.92
SNRPFP62306 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.77■□□□□ 0.92
SNRPFP62306 AC097488.1-201ENST00000507834 756 ntBASIC20.77■□□□□ 0.92
SNRPFP62306 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.77■□□□□ 0.92
SNRPFP62306 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SNRPFP62306 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRPFP62306 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNRPFP62306 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.77■□□□□ 0.91
SNRPFP62306 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.91
SNRPFP62306 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNRPFP62306 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SNRPFP62306 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRPFP62306 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SNRPFP62306 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRPFP62306 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
SNRPFP62306 SNORA78-201ENST00000459373 127 ntBASIC20.76■□□□□ 0.91
SNRPFP62306 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.76■□□□□ 0.91
SNRPFP62306 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.76■□□□□ 0.91
SNRPFP62306 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRPFP62306 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRPFP62306 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRPFP62306 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms